YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|37531190, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.85
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAIVYAVVAR GTVVLAEFSA VSGNAGAVAR RILEKLPPDA ESRLCFAQDR YIFHVLRSPP  60
   61 PAAADGLTFL CMANDTFGRR IPFLYLEDIQ MRFIKNYGRI AHNALAYAMN DEFSRVLHQQ 120
  121 MEYFSSNPSA DTLNRLRGEI HTVMVDNIEK ILDRGERISL LVDKTSTMQD SAFHFRKQSR 180
  181 RLRRALWMKN AKLLAVLTAV IVLLLYLIIA AFCGGLSLPS CRS

Type	Start	End	Confidence
Cytoplasmic	1	190	0.94
Transmembrane Helix	191	214	0.89
Non-Cytoplasmic	215	223	0.85