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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|34894492, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.95
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGTATMATAV GAAVVLYFVL SRRLAQEDGG GGGGGGGGGG KRRRVRAARR PAQPPATWIE  60
   61 AVGTLAETLR FTYSETLGKW PIGDLAFGIK YLMRRQGNLH VASVYAGNNC IELKGPEIME 120
  121 ELIVLRRLID LCFLFSKKPF PVFLELAGFS PEDVLIEEPK AGILKPAHTI LRDECTKSFL 180
  181 VLIRGTHSMK DTLTAATGAV VPFHHSLLDE GGVSKLVLGY AHCGMVAAAR WIARSITPCL 240
  241 CQAVSQCPDY QIRVVGHSLG GGTAALLTYI LREHQELSST TCVAFAPASC MTWELAESGK 300
  301 HFVRTIVNGA DLVPTVSTSS IDDLRSEVTA SSWLNDLRDQ IQQTRFLNVV YRSATALGTR 360
  361 LQSFSGARDR VAGAGALLRP VSSKTQVVMK QAQNVAQAVA RSRSAFSSWS CMGARRRGVG 420
  421 VVAASAKEEI TVETHVTSTT NSESYVVEQR GTKTMEELQY TADSVSVHEE TEEEALLSEH 480
  481 ESSREHAEEE ITEGEMWFQY EKDLDRQAEV EAQTRQEEAA AAKEIMEEES AVLKNVEDRQ 540
  541 SFSSDSLERQ QFYPPGRIMH MVAMPPADSC PDDPVAADEC SVGIYETPRD LYSKIRLSNT 600
  601 MINDHYMPMY KKTMEILIEK FANNDENFCT DSTVE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle