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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|51593409, gi|...
Protein type: Transmembrane
Type Confidence: 0.84
Topology Confidence: 0.69
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAWLRLQPLT SAFLHFGLVT FVLFLNCLRA EAGDSGDVPS AGQNNESCSG SSDCKEGVIL  60
   61 PIWYPENPSL GDKIARVIVY FVALIYMFLG VSIIADRFMA SIEVITSQER EVTIKKPNGE 120
  121 TSTTTIRVWN ETVSNLTLMA LGSSAPEILL SLIEVCGHGF IAGDLGPSTI VGSAAFNMFI 180
  181 IIGICVYVIP DGETRKIKHL RVFFVTAAWS IFAYIWLYMI LAVFSPGVVQ VWEGLLTLFF 240
  241 FPVCVLLAWV ADKRLLFYKY MHKKYRTDKH RGIIIETEGD HPKGIEMDGK MMNSHFLDGN 300
  301 FTPLEGKEVD ESRREMIRIL KDLKQKHPEK DLDQLVEMAN YYALSHQQKS RAFYRIQATR 360
  361 MMTGAGNILK KHAAEQAKKT SSMSEVHTDE PEDFASKVFF DPCSYQCLEN CGAVLLTVVR 420
  421 KGGDISKTMY VDYKTEDGSA NAGADYEFTE GTVVLKPGET QKEFSVGIID DDIFEEDEHF 480
  481 FVRLSNVRVE EEQLAEGMLP AILNSLPLPR AVLASPCVAT VTILDDDHAG IFTFECDTIH 540
  541 VSESIGVMEV KVLRTSGARG TVIVPFRTVE GTAKGGGEDF EDAYGELEFK NDETVKTIRV 600
  601 KIVDEEEYER QENFFIALGE PKWMERGISE VTDRKLTVEE EEAKRIAEMG KPVLGEHPKL 660
  661 EVIIEESYEF KSTVDKLIKK TNLALVVGTH SWRDQFMEAI TVSAGGDEDE DESGEERLPS 720
  721 CFDYVMHFLT VFWKVLFACV PPTEYCHGWA CFVVSILIIG MLTAIIGDLA SHFGCTIGLK 780
  781 DSVTAVVFVA FGTSVPDTFA SKAAALQDVY ADASIGNVTG SNAVNVFLGI GLAWSVAAIY 840
  841 WAMQGQEFHV SAGTLAFSVT LFTIFAFVCL SVLLYRRRPH LGGELGGPRG CKLATTWLFV 900
  901 SLWLLYILFA TLEAYCYIKG F

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle