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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|20161030, gi|...
Protein type: Transmembrane
Type Confidence: 0.81
Topology Confidence: 0.74
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVPKCYDQKQ RGGLGGSPYR AYALRGKRSN SWRALENAPR LHYTVALPHQ LQLPSLPRTR  60
   61 THGRTRKQAG QRVPPPLSRS LSAATAAAAA SLRVPPPLSR SLSAAATAAA AAAAAALVCV 120
  121 AVVNSFSLKP LDVATAGDAV VPKTRARMAA TPATATFPHL GLRPKPLLRR RLRRIAVSVS 180
  181 PSGPDETPAD DPPVIPSILV KNTEPEDVAR RRSWVEHGWA PWEEIMTPEV AFARHSLNEG 240
  241 EEVPLQTPES QEAFRMLTPA YREKVESEPG YEERLFATRD TPEPLETSWA GELPLRLVPP 300
  301 RDWPPPGWEV DPGELEFIRE AHREFTERLD MAAVAAKGVT HVDKVENAPD DLGLDRYKMF 360
  361 LKQYKEWVEA NRDRLEEESY KFDQDYYPGR RKRGEDYKED MLELPFFYPG QICRGRVISV 420
  421 HLYQGAFVDI GCVHDGWVPI KGNDWYWIRH HIRPGMEVHV EILAKRDPYR FRFPLEMRFV 480
  481 YPNIDHLIFN RFDYPPIFHR KEDTNPEQLW REGGRPPIPR KKPLKDMEKE PLVSDHPFVE 540
  541 TLWLWHNAEQ MILDHEEENP DKFKDTTYES TVDSSIVHEE NRVQHTEGYF KDTLLKKEVV 600
  601 NIDIKELDLD AARAERQLIK KLRKEAEERG EEYKVGKLRR NKEMDEYDLM QWRRSFEERE 660
  661 ALIRDICCRK AFGLPVDEPG RYDVDETEVY GKDYYDPSKP MYRYDYWGEP KNTEKTKLER 720
  721 EVELHNQQVI GDAKKWCEMS YDDYVRQKVR MEAAEARERQ RKASEPQEED EKYEDEMDLD 780
  781 LKKMMDPQAP HNRCFITK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle