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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: LBD6_ORYSI
Protein type: Globular with Signal Peptide
Type Confidence: 0.90
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASSSASSVP APSGSVITIA SASASAAANT AACGTGSPCA ACKFLRRKCQ PDCVFAPYFP  60
   61 PDNPQKFVHV HRVFGASNVT KLLNELHPYQ REDAVNSLAY EADMRLRDPV YGCVAIISIL 120
  121 QRNLRQLQQD LARAKFELSK YQQAAAAAAA ASASTGTNNG PHSMAEFIGN AVPNGAQSFI 180
  181 NVGHSAALAS VGGAAACFGQ EQQFSAVHML SRSYEGEPIA RLGGNGGYEF GYSTSMAGGG 240
  241 HMSGLGALGG APFLKSGIAG SDERQGAGQ

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle