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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|50902216, gi|...
Protein type: Transmembrane
Type Confidence: 0.97
Topology Confidence: 0.93
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAFGRGSKMD GRRSSPSSSL CTTTTVVVFV ALCLVGAWMM TSSTIFPLEI TSNKKAAVKE  60
   61 QPARVNYGAS EEAAAASGNS AEGVDRFGDT DNNDNAVPEE PNNTVPSEEE KFSENTVEKP 120
  121 VESSEEKAPP KEKEESKDTF DDANGKTEQS SAKEDGDSES GSGQSDGSKN GDDEEKSEEK 180
  181 KDDEQSDGER KDDQEEKAEG SGSKDTTDQP QIEETVDESG EKGQGAKSNE VFPDGAQSEL 240
  241 LKESNTENGS FKTQDAESKN EKESQAASNS SDDETTYNWK LCNNNAGTDY IPCLDNEKAI 300
  301 KKLRTTKHYE HRERHCPVEP PTCVVPLPEG YKRPVEWPTS RDKVWYSNVP HTKLAEYKGH 360
  361 QNWVKVSGDH LLFPGGGTQF KNGALHYIDT IQQALPDIAW GKRSRVILDV GCGVASFGGY 420
  421 MFERDVLTMS FAPKDEHEAQ VQFALERGIP AISAVMGTKR LPYPSRVFDV IHCARCRVPW 480
  481 HIEGGMLLLE LNRLLRPGGY FVWSATPVYQ KLPEDVEIWN AMSSLTKAMC WKMVNKTKDK 540
  541 LNQVGMAIYQ KPMDNSCYEK RPENSPPLCK ETDDADAAWN VPLQACMHKL PAGQSVRGSK 600
  601 WPETWPQRLE KTPYWIDDSH VGIYGKPGNE DFEADYAHWK RVVSKSYVNG MGIDWSKVRN 660
  661 VMDMRAVYGG FAAALRDQKV WVMNIVPTDS ADTLPIIYER GLFGMYHDWC ESFSTYPRTY 720
  721 DLLHADHLFS KLKKRCKLLP VFAEVDRILR PEGKLIVRDN AETINELQGM VKSLQWEVRM 780
  781 TYTKGNEGLL CVQKSMWRPK EIEASM

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle