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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|115440837, gi...
Protein type: Transmembrane
Type Confidence: 0.98
Topology Confidence: 0.92
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MANRRKFSQA GGGGGGGVFD PFGTKQAVSS LRKGGRLPVY VAGVFFVIFV IIMYGEDIRS  60
   61 LTLDPIARAG TTPARIVEPV VTEERHVARV NPPRREVSSA EKAAALPLDV DERPKLATPT 120
  121 PTEAAKEVPK VEKIRKPKKP KTTKKKPRKP RPAKKTVAAA AGGLLGVPET CDLSKGEWVF 180
  181 DNTSYPLYRE EQCEFLTSQV TCMRNGRRDD TYQKWRWQPK DCSMPRFDAK LFMERLRGKR 240
  241 FMFVGDSLNR NQWESMVCLV QSAMSPGKKY VTWEDQRVVF HAVEYNATVE FYWAPFLVES 300
  301 NSDDPKIHSI QHRIIKADAI AAHAQNWRGV DYLVFNTYIW WMNTLNMKIM RPGGQSWEEH 360
  361 DEVVRIEAYR KVLTTWASWV NDNIDPARTS VFFMSISPLH ISPEVWGNPG GIRCAKETMP 420
  421 LLNWHGPIWL GTDWDMFHAA ANVSRTAATR VPITFVDVTT MSERRKDGHT SVHTIRQGKV 480
  481 LTPEQQADPG TYADCIHWCL PGVPDIWNLI LYTRIMSRPQ LV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle