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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|215740684, gi...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.67
Topology Confidence: 0.47
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLPPAPTRNP GACRFIPLLP PKPLLSPAAA AASSRGGLCV AAASRRDFLL LVPSIAAAST  60
   61 VLQSLPLSAS AADDEKQAAS PAPGPAAAPA PTSAGEPEAE ALSRVYDATV IGEPQAVGKD 120
  121 ARRRVWEKLM AARVVYLGEA ELVPDRDDRV LELEVVRKLA ARCAEAGRSI SLALEAFPCN 180
  181 LQEQLNQFMD RRIDGNNLRL YTSHWAPERW QEYEPLLNYC RDNGVKLVAC GTPLEVSRTV 240
  241 QAEGIRGLSK AQRKLYAPPA GSGFISGFTS ISGRSLIDKI SAIHGSPFGP SSYLSAQARV 300
  301 VDDYTMSQKI MKEITNGYPS GMLVVVTGSS HVIYGSRGIG VPARISKKMQ KKKQVVVLLN 360
  361 PERQGIRREG EIPVADFLWY SAAKPCSRNC FDRAEIARVM NAAGRRREAL PQDLQKGIDL 420
  421 GVVSPEILQN FFDLEKYPVM AELIHRFQGF RERLLADPKF LHRLAIEEGI SITTTLIAQY 480
  481 EKRKGRFLEE IDYVLTDTIR GSVVDFFTVW LPAPTISLLS LGDNGSGESL ELLKGLLGSL 540
  541 PDNAFQKGIM GQSWNTNQRF ASVLMGGIKL AGVGFISSIG AGVASDVLYA ARRVLRPSTS 600
  601 VETARRRTPI WKSATVYSCF LGTSANLRYQ VIAGLVEHRL GEYLMAYYNQ PLLANLLSFV 660
  661 SRTINSYWGT QQWIDLARAT GLQTSKKELP SPEISNLPDM PLLECGTTEV QNMDDSNKQQ 720
  721 PMK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle