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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: RNC1_ORYSJ
Protein type: Globular with Signal Peptide
Type Confidence: 0.85
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAPPAMAFQA LALGPLPLPL PAARRRRRVR VLAVAADHTP PPPPSPSSPP EPANSPSRLL  60
   61 RELAERKKAV SPKKKHPPRR FILKPPLDDE RLTQRFLSSP QLSLKALPLL SSCLPSAPLS 120
  121 AADRTWMDEY LLEAKQALGY PLAPSETLGD GDDDGCPARH FDVLLYLAFQ HLDTSCERTR 180
  181 TRHVRSGHSR LWFLGQYVLE LAFCEFFLQR YPRESPGPMR ERVFALIGKR AIPKWIKAAS 240
  241 LHNLVFPYDD LDKMIRKDRE PPAKAVFWAL FGAIYLCFGM PEVYRVLFEA FGMDPEDESC 300
  301 QPKLRRQLED VDYVSVEFEK RQLTWQDVAA YRPPPDALFA HPRLFRACVP PGMHRFRGNI 360
  361 WDFDNRPKVM NTLGYPLPMN DRIPEITEAR NIELGLGLQL CFLHPSKHKF EHPRFCLERL 420
  421 EYVGQKIQDL VMAERLLMKH LDAPGRWLAE KHRRLLMNKY CGRYLRDKHL HHYIIYGESV 480
  481 QDRFEHNRRL RNPSTTAVQQ AIHGLAYCVY GKPDVRRLMF EVFDFEQVQP KAV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle