YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|33641863, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.82
Topology Confidence:	0.49
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNENEGIIIE NINNDSGSTY LMNILGILIP IKIVVTIYLF SKARLPVGFA RYFGRLYHFM  60
   61 TNPIRLGLQI AGLRGPFISQ LDDNVYLGAM PMGSDVTLLF YKYKINSIVN LCDEYQGPTQ 120
  121 HYTQYGMQQL YVPVVDHFEP DVEIIEKSIQ FILKQIELGN RVYIHCKAGR GRSGAIAICW 180
  181 IAYSRRVSLE VAQKILLEKR KIVRKQLYKQ KNVNQYYSSY CLNSNINSTT SI

Type	Start	End	Confidence
Non-Cytoplasmic	1	19	0.76
Transmembrane Helix	20	41	0.74
Cytoplasmic	42	232	0.49