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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: P2C06_ORYSJ
Protein type: Globular with Signal Peptide
Type Confidence: 0.96
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEDVAVAAAL APAPATAPVF SPAAAGLTLI AAAAADPIAA VVAGAMDGVV TVPPVRTASA  60
   61 VEDDAVAPGR GEEGGEASAV GSPCSVTSDC SSVASADFEG VGLGFFGAAA DGGAAMVFED 120
  121 SAASAATVEA EARVAAGARS VFAVECVPLW GHKSICGRRP EMEDAVVAVS RFFDIPLWML 180
  181 TGNSVVDGLD PMSFRLPAHF FGVYDGHGGA QVANYCRERL HAALVEELSR IEGSVSGANL 240
  241 GSVEFKKKWE QAFVDCFSRV DEEVGGNASR GEAVAPETVG STAVVAVICS SHIIVANCGD 300
  301 SRAVLCRGKQ PVPLSVDHKP NREDEYARIE AEGGKVIQWN GYRVFGVLAM SRSIGDRYLK 360
  361 PWIIPVPEIT IVPRAKDDEC LVLASDGLWD VMSNEEVCDV ARKRILLWHK KNGTNPASAP 420
  421 RSGDSSDPAA EAAAECLSKL ALQKGSKDNI SVIVVDLKAH RKFKSKS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle