YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|215737391, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.73
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAASLQAAAT LMQPAKLGGR ASSAALPSRP SSHVARAFGV DTGAAGRITC SLQSDIREVA  60
   61 NKCADAAKLA GFALATSALL VSGASAEGVP RRLTFDEIQS KTYMEVKGTG TANQCPTVEG 120
  121 GVDSFAFKAG KYNMKKFCLE PTSFTVKAEG VAKNAPPEFQ KTKLMTRLTY TLDEIEGPLE 180
  181 VSSDGTIKFE EKDGIDYAAV TVQLPGGERV PFLFTIKNLV ATGKPESFGG PFLVPSYRGS 240
  241 SFLDPKGRGG STGYDNAVAL PAGGRGDEEE LAKENVKNAS SSTGNITLSV TKSKPETGEV 300
  301 IGVFESVQPS DTDLGAKVPK DVKIQGVWYA QLE

Type	Start	End	Confidence
Signal Peptide	1	21	0.71
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	333	0.98