YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|108710775, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.89
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPPPPPPSLA RLHQRLSLSL LRGRSPPAAA DAFLRRGLAS SASSSSSAAA AAAVAAAAAG  60
   61 REKSSRRTLA YLLGVAAAMV GASYAAVPLY RRFCQATGYG GTVQRRESVE EKISRHARDG 120
  121 TTTSREIIVQ FNADVADGMP WKFIPTQREV KVKPGESALA FYTAENRSSA PITGVSTYNV 180
  181 APMKAAIYFN KIQCFCFEEQ TLLPGEQIDM PVFFYIDPEF ETDPKMEGVN NIVLSYTFFK 240
  241 VNDS

Type	Start	End	Confidence
Signal Peptide	1	58	0.86
N-region	1	49
H-region	50	55
C-region	56	58
Cleavage Site	58	59
Non-Cytoplasmic	59	244	0.95