YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|125529062
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRCWRRLAAA GALLAALCAA LALAVAEHRR PDTTASSSSR RPLRFASGGG FKVALFADLH  60
   61 YGENAWTDWG PRQDAGSDRV MAAVLDAEKP DFVVYLGDLV TANNLGIPNA SLYWDRAISP 120
  121 TRGRGIPWAT VFGNHDDMPF EWPPEWFSPA GVPPLHCPPP SMSDSDCSFR GTPRLELMTS 180
  181 EVIRNGLSYS SNGPKDLWPA VSNYVLQVLS QKRDDPALLM YFLDSGGGSY PEVISSAQVQ 240
  241 WFHSQSQFLN PNGRIPEIIF WHIPSTAYAK VAPKAKSEIR KPCVGSINRE EVAPQEAEWG 300
  301 MMDALVKRAS VKAIFVGHNH GLDWCCPHEK LWLCFARHTG YGGYGNWPRG ARVIEISEQP 360
  361 FSIQSWIRME DGTTHSDISL SS

Type	Start	End	Confidence
Signal Peptide	1	26	0.96
N-region	1	17
H-region	18	23
C-region	24	26
Cleavage Site	26	27
Non-Cytoplasmic	27	382	0.99