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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|41469524, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.64
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAVGVTSQLF QGVTATNRFC QTNKFRNPDI RSSLTSTSLS SVPNGHNCWG HNILERNYRP  60
   61 MLYVPSRYRA LGVRSFALPV SLQEIPLVKS TSVALTRSCD TLLANPATAL VVPAIGIIVF 120
  121 ALWGFLPLMR DIRNRFDHGG NWKKSPTYLI STSYLQPLLL WTGATLICRA LDPVVLPSAA 180
  181 SQAVKTRLVT FVRSLSTVLA IAYILTSLIQ QLQKFLMDMR NPNDSRRMGF DFAVKAVYTG 240
  241 IWIAAISLFM ELLGFNTQKW ITAGGFGTVL LTLAGREIFT NFLSSVMINA TRPFVVNEWI 300
  301 NTKIDGVEVS GIVEHVGWWS PTIIRGDDRE AIYIPNHKFT VSILRNNTQR THWRIKTYLA 360
  361 LSHMDAAKIG IIVADMRKVL AKNPHIEQQR LHRRVFFEKI DPKTQALMIY ISCFVKTSHF 420
  421 EEYLNVQEAV MLDLLRIVGH HRARLATQIR TVQKSYGNAD IDNIPFGEEM YSRVRGRPLL 480
  481 IDTSARISDD KSKPRPASRE DHKVKTVTSA EAKSASADNA SISNSEKQEQ KKSVPEDGRM 540
  541 KNSKNDHATT TSPSSPWSEN MDPIASTSKT GKGKTQGAEA TEREGDGAVS VANSKKESRP 600
  601 VFEDNIVLGL ALEGSKRTLP IDDGMNPHLS LSETEQDTVE AASSPKDKKG QEKGDQRNLD 660
  661 R

YRC Informatics Platform - Version 3.0
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