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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CLPB2_ORYSJ
Protein type: Globular with Signal Peptide
Type Confidence: 0.98
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAAPPLAAG LRPAMAAAQA PVVAAAWGVG ARRGAALSSS ARCRALRLSR GGGGGRDGWV  60
   61 PPPVVGRMPP RTLSVRCAAS NGRITQQEFT EMAWQSIVSS PEVAKESKHQ IVETEHLMKS 120
  121 LLEQRNGLAR RIFSKAGVDN TRLLDATEKF IQRQPKVLGE DPGSMLGRDL EALIQRARDF 180
  181 KKEYGDSFVS VEHLVLGFAE DKRFGRQLFK DFQITVQSLK TAIESIRGKQ NVIDQDPEGK 240
  241 YEALDKYGKD LTAMARQGKL DPVIGRDDEI RRCIQILSRR TKNNPVLIGE PGVGKTAIAE 300
  301 GLAQRIVQGD VPQALTNRRL IALDMGALIA GAKYRGEFED RLKAVLKEVT DSDGQTILFI 360
  361 DEIHTVVGAG ATNGAMDAGN LLKPMLGRGE LRCIGATTLD EYRKYIEKDP ALERRFQQVY 420
  421 VDQPSVEDTI SILRGLRERY ELHHGVRISD SALVAAALLS DRYISGRFLP DKAIDLVDES 480
  481 AAKLKMEITS KPTALDEIDR AVIKLEMERL SLTNDTDKAS RDRLSRIEAE LSLLKEKQKD 540
  541 LTEQWEREKS VMTKIQSIKE EIDRVNVEIQ QAEREYDLNR AAELKYGSLN ALQRQLQTTE 600
  601 KELDEYQSSG KSMLREEVTQ DDIAEIVSRW TGIPVSKLKQ SDREKLLYLE EELHKRVVGQ 660
  661 DPAVKAVSEA IQRSRAGLSD PNRPIASFMF MGPTGVGKTE LAKALAAFMF NTEEAVVRID 720
  721 MSEYMEKHSV SRLIGAPPGY VGYEEGGQLT EAVRRRPYSI ILFDEIEKAH GDVFNVFLQI 780
  781 LDDGRVTDSQ GRKVSFTNSI IIMTSNVGSQ FILNMDEEGG STDSAYENIK KRVMDAARSV 840
  841 FRPEFMNRID EYIVFKPLER EQINSIVKLQ LARVQKRIAD RKIKLEVSPG AVEFLGSLGY 900
  901 DPNYGARPVK RVIQQYVENE LAKGILRGDF KDEDSILVDT QVTVPSNGQL PQQKLVFHKM 960
  961 SEESAPAAAE DEKFLPAV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle