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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|50916727, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.82
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMSSFQGYNF LEPSTSMIVW WRDQFRKLMF NWHSKTLNLS ELWIPIVVCF TIGIVGLLTV  60
   61 LYLFSLWRRK ISLSWMKMIA RSKRKNFERT HKVPTAEHVW SVESLLRAKG LKCCVCLESI 120
  121 SPAQPLGQMT TSENMVHRCD VCGAAAHMIC SSNSQKDCKC VSMFGSKHVV HQWTVLWTDI 180
  181 ADQSEEAQYC SYCEEPCSGS FLGGPPIYCC MWCQRLVHVD CHSSMATETG DICDLGPFKR 240
  241 LILSPLFVKT RSKPGGILSS ITHGANEFAS TVRGHLRNRS KKQKEHSRVP SDCNVGDSND 300
  301 DSSCDTAANA NQRAKDLKSS GDNVQRSAEN EHDSSESDCK EVIPEPRRLH HDDAEGAKLK 360
  361 YILDDLPADA RPLLVFINKR SGAQRGDSLK HRLHFLLNPV QVFELSSSQG PEIGLLLFRK 420
  421 VPHFRILVCG GDGTVGWVLD AIDKQNYESP PPVAILPAGT GNDLSRVLSW GGGLGAVEKQ 480
  481 GGLCTVLHDI EHAAVTILDR WKVAIEDKRG KNVLMVKYMN NYLGIGCDAK VALDIHNLRE 540
  541 ENPEKFYSQF LNKVLYAREG AKSMIDRTFV DLPWQVRLEV DGTEIEIPED SEGVLVANIP 600
  601 SYMGGVDLWK SEDDNPDNFD PQSIHDKMVE VVSISGTWHL GTLQVGLSRA RRIAQGQSIK 660
  661 IQIFAPFPVQ VDGEPWTQNP CTLKISHHGQ AFMLRRTIEE SLGHAAAIVT DVLENAESSH 720
  721 LITASQKRAL LQEMALRLS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle