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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|34902566, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.86
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MWTLHVILSL FFLPLFPFSL STSAFCKRRW RQRQRRRRWR EGRRWRHWSG GGDGRGPEWR  60
   61 RRFGLELAWM EAEAATEEMA GGRGPERRRV GGEPGGRWWL AGRELVAKAA PIFLPPRRAP 120
  121 HAPAPIGGAD YAVGSVPRAA KGGRLGLRGG LTDGDAGLAE EGCGRRATIT AEESAVANRT 180
  181 AAGTRLAIST SSNFHKAASA KKKRRSQKKT TRETTQLQES LGSSLSPFWV VSVILQELSC 240
  241 SSSLLGLKVD FCTGTAKALG IVLQKAQQSE AYCPSLSLLL LLKTMATFFS SSTNQRDLTG 300
  301 GGGDGGDMSF QHYPPPSNPY SDSSAGGLIP LPASIVSHSH IAHGGGDEPA AFREAATADG 360
  361 GEMGLQTQLL MAHGAAARGH QGGLSLSLGT QVPVSLYQYR PAGMAAASLL SPSQSSPMAG 420
  421 RSAQNSIYVQ NSRFLRAARE LLDEVVNVRD AIKRKGDKNQ GKDSGECKGG DAAGDDKAGS 480
  481 NPQEQESNSA PELSPSERQD LQNKVTALMA MLDQVDRRYR HYHHQMQIVM SSFDAVAGGG 540
  541 AARPYTALAL QTISRHFRSL RDAIGAQAQA ARRGLGEQDA SAQGGGGLSR LRYIDQQLRQ 600
  601 QRAMQQFGMM QQPQHAWRPQ RGLPESAVSV LRAWLFEHFL HPYPKDSEKL MLARQTGLSR 660
  661 GQVSNWFINA RVRLWKPMIE EMYKEEFGAE MDSNSSSENG GGGGGKGKDE AISSEDRDEF 720
  721 QSPSSAAAAR HAGVAGQLNN PFKSEAMGGA ALDVGVGVVG LSSCLGGAMG TYATGLNLNH 780
  781 HVHHPGAGGT SLLHDALHHH HHGGGGDARF VSYGDMADLG GGGGYDGGSV SLTLGLQHCN 840
  841 NAGPVPAEQQ GLLYGSAGDF DYINGSDDRQ RFGPASQLLH DFVA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle