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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|215694344, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGSLHKFSVI LLMLCFATLG SAQYVKYKDP KQPVSVRVKD LLGRMTLAEK IGQMTQIERE  60
   61 NATAEQIAKY FIGSVLSGGG SVPAPQASAQ AWASMVNEMQ KGALSTRLGI PMIYGIDAVH 120
  121 GHNNVYKATI FPHNVGLGAT RDPDLVKRIG EATALEVRAT GIPYVFAPCV AVCRDPRWGR 180
  181 CYESYSEDPK VVQSLTTLIS GLQGDVPSND VGRPYVGGSK KVAACAKHYV GDGGTVKGIN 240
  241 ENNTIIDTHG LLTIHMPPYY NSIIRGVSTV MVSYSSWNGV KMHANHHLIT DFLKNKLRFR 300
  301 GFVISDWQGI DRITSPPHKN YSYSIEAGIG AGIDMIMVPY TYTEFIDDLT EQVNNKIIPM 360
  361 SRIDDAVYRI LRVKFTMGLF ESPFADSSLA DELGKQEHRE LAREAVRKSL VLLKNGKSSY 420
  421 SPVLPLPKKA GKILVAGSHA DDLGRQCGGW TITWQGQPGN NITAGTTILS AIKATVDPST 480
  481 TVVYSENPDS SVVTGDKYDY AIVVVGEPPY AEGFGDNLNL TIPEPGPTVI QTVCKSIKCV 540
  541 VVLISGRPLV VEPYIGGIDA FVAAWLPGTE GQGVADVLFG DYGFTGKLSR TWFKSVDQLP 600
  601 MNVGDAHYDP LFPFGYGLTT QAHSS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle