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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|18087663, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.95
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRGGLRRGLG ILLLPLSSSP SRAPRPPVPL AALLVYHRRL DVFARRSFCS SGGGYAVEQF  60
   61 SDDEYDHEYE DHRPSSSVAN IDEWRWKLSM LQRNAEEQEI ISRDRRDRRD YDQIANLAKR 120
  121 MGLYSEMYGK VIVASKVPLP NYRPDLDDKR PQREVVIPLS LQRRVEGLVQ EHLDRALLPD 180
  181 KCGTGNGSEM AEKAENVNLD EQQDSLLDRS VMEKILQRKS IRMRNFQRSW QESPEGVKML 240
  241 EFRKSLPAYK EKERLLAAIA RNQVIVISGE TGCGKTTQLP QFVLESEIES GRGAFCNIIC 300
  301 TQPRRISAMA VAERVSTERG ENLGESVGYK VRLEGIKGKD THLLFCTSGI LLRRLLSDRN 360
  361 LNGVTHVFVD EIHERGMNED FLLIVLKDLL SRRRDLRLIL MSATLNAELF SSYFGGAPTI 420
  421 HIPGFTYPVR AHFLEDILER TGYKLTSSNQ LDDYGQDKVW KTQRQLLPRK RKNQITTLVE 480
  481 DALKTSSFET YGSRTRDSLS NWNPDCIGFN LIEAVLCHIC RKERSGAVLV FMTGWDDISC 540
  541 LKDQLKAHPL LGDPNRVLLL ACHGSMATAE QRLIFEKPPP NVRKIVLATN MAEASITIND 600
  601 IVFVVDCGKA KETTYDALNN TPCLLPSWIS KASARQRRGR AGRVQPGECY HLYPRCVYDA 660
  661 FADYQLPELL RTPLNSLCLQ IKSLQVGSIG EFLSAALQPP APLAVQNAVE FLKMIGALDE 720
  721 NENLTDLGRY LSMLPVDPKL GKMLIMGAVF RCIDPILTVV AGLSARDPFL LPQDKRDLAG 780
  781 TAKSRFSAKD YSDHMALVRA YEGWKDAERE GSAYEYCWRN FLSAQTLQAI HSLRKQFSYI 840
  841 LKDAGLVDSD ANTNNSLSHN QSLVRGIICS GLFPGITSVV HRENSMSFKT MDDGQVLLYA 900
  901 NSVNAKYQTI PYPWLVFGEK VKAGHLKMLD GYIDLFMDPS LCECYLQLKE ELDKLVQKKL 960
  961 EDPSFDIHKE GKYILYAAQE LAAGDLCEGR FVFGRETSRA RLSSSDDTKG NIIKDGMNPK1020
 1021 SLLQTLLMRA GHTPPKYKTK HLKTNEFRAI VEFKGMQFAG KPKRNKQLAE RDAAIEALGW1080
 1081 LTQTSGTKLQ DDGDDSPLDL TDNMLKLLSR PRRRSRNNSR K

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle