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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|113549496, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.93
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRRVAPAMIA AAAGGGGGYD GEEADAGAAV VEKALPNGDV YRGGFAGGAP HGKGKYVWAD  60
   61 GCMYEGEWRR GKASGKGRFS WPSGATFEGE FRGGRIEGQG VFVGPDGATY RGAWAADRRH 120
  121 GVGAKSYANG DYYEGQWRRN LQDGHGRYVW ANGNQYVGEW RAGVISGRGV LIWANGSRYD 180
  181 GVWENGVPRG TGVFTWPDGS RYVGSWPRSC VDMPAISGTF FPPVGAGGGG AVRKRSSVEG 240
  241 VGDKASAVPR ICIWESEGEA GDITCDIVDA LEASMLYREA TTVGGGVPYV RTQRSTRRVA 300
  301 SGGTCWAPSA AATPEGKRPG QTISKGHKNY ELMLQLQLGI RHSVGKSAAV PMRELSPADF 360
  361 DPKEKFWTRF PPEGSKVTPP HSSSDFRWKD YCPMVFRHLR KLFSVDPADY MIAICGNDAL 420
  421 RELSSPGKSG SFFYLTQDDR FMIKTVKKSE VKLLIRMLPS YYQHVSQYRD SLITRFYGVH 480
  481 CVKPLNGQKV RFIVMGNLFC SEYRIHRRFD LKGSSYGRTA DKFDDEIDET TTLKDLDLNF 540
  541 VFRLQRTWFR DLHEQLRRDC EFLESEGIMD YSFLVGVHFC DDLSASKTGL STFTASPKFS 600
  601 MKRESFQGGG GMPELCFSDS DFDRIPDCRK PLIRLGAHMP ARAEQASRRS EFDPFLLNGG 660
  661 GFLAPNQTGE VYDVILYFGI IDILQDYDIT KRLEHAYKSL QTDPNSISAV DPKLYSKRFQ 720
  721 DFIGRIFVED G

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle