YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|41469444, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAPLVSLSLP LPCAVPASSL PPRAEPDASS SFHPPASSSS SPRGGRLALA AAQPGSGRRW  60
   61 VGRWRAGVSS FSFLAPFFAG NKEKENREKA ERLKEELLAT IRPLDRGVDA TAEDKERVEK 120
  121 IVQQLEEVNQ VKEPLKSDLL NGKWELLYTT SESILQPQRP KFLRPFGTIY QAINTDTLRA 180
  181 QNMETWPYFN QVTANLVPLN SRRVAVRFDY FKIFNLISIK APGSGKGELE ITYLDEELRA 240
  241 SRGDKGNLFI LKMVDPTYRV PL

Type	Start	End	Confidence
Signal Peptide	1	19	0.97
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	262	0.99