YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|6606532
Protein type:	Globular with Signal Peptide
Type Confidence:	0.92
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAFMFFLTI AAFTAPVYSS RAPLTSAAVR DPELVVQEVQ RSLNVSRRRL GYLSCGTGNP  60
   61 IDDCWRCDPD WADNRQRLAD CAIGFGKNAI GGRDGEIYVV TDSGDDDPVN PKTGTLRYAV 120
  121 IQEEPLWIIF KRDMVIQLKE ELIMNSHKTI DGRGASVHIS GGPCITIQYV TNIIIHGVHI 180
  181 HDCKQGGNAY VRDSPGHYGW RTVSDGDGVS IFGGSHVWVD HCTLSNCHDG LIDAIHGSTA 240
  241 ITISNNYLSH HDKVMLLGHS DELTSDKSMQ VTIAFNHFGE DLVQRMPRCR HGYFHVVNND 300
  301 YTHWEMYAIG GSAAPTINSQ GNRFLAPNDR FAKEVTKRED AQESEWKKWN WRSEGDQMLN 360
  361 GAFFTPSGAG ASSSYAKASS LGARSSSLVG TITVSAGVLS CKKGSRC

Type	Start	End	Confidence
Signal Peptide	1	19	0.99
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	407	0.99