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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|50920131, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.45
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTIPMAHSSR PTLGFPLGTA LLIFVIFSLS GIFSCCYHWD KLRAFLWSRH PDVILQEGQH  60
   61 TVISIASPSK TTSDHKNEKA EKECGLPVIM PGDRIPKFFA RPCPHEKCLP AAEEEEAEPI 120
  121 PGVALMHTSY WWHLAILKYE PAIDGAYRGW RQFGWGFAVA MRADGCPLCW TAIRVQTVYD 180
  181 AYGPLTLYRD LVSQGKLQHD IYQENVATQL DNLLRRLEQY EMEMEDYHAR LSMWENTREK 240
  241 QRRRLLVQEA EDKQRDGVWI DEKRGFLDKL VSRKRRGNIE PGVGKWVSYL NREKKLDTLV 300
  301 GQKPVAPIAP KGIYLYGNVG SGKTMLMDMF YGATEGLIKH RRRFHFHEAM LEIHDHMHDV 360
  361 WKRRDEDKSI ESSAFSWISS LPFDGKIKEW LIGEEKYKQN TQQNHILLAV ADKFLVDRQA 420
  421 NKSGASILCF DEIQTIDVFA VVALSGILSR LLSTGTVLVS TSNKAPEDLN QDGMQREIFL 480
  481 DLLSKLDENC NKILVGTETD YRRLIPTDGL TQIHYFWPLT SDIRSMYEAM WHDITRQTGG 540
  541 NIISVTIPVM FGRYLEIPKS CNGVARFDFE YLCGRPVGAA DYIAIARNYH TIFISDIPAM 600
  601 SMKIRDKARR FITLIDELYN HHCRLVCLAA SSIDDLFQGT DEGPLFDLES FQFEGEAEGA 660
  661 KLRRDVLAEG NVGAAPSPTG LVAILSGQEE MFAFRRAISR LIEMQTSLYL ERVERVHSSL 720
  721 QQQSSVLTKS STVSQSAPSV 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle