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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|222637676, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPPPRTKHRP LLLATTFLSL LLLLLLLSLL STAHKAFAVA DDDGHRARVL LAADGGERNA  60
   61 DAEHAAAVDR HCAGTLHRDV CVSTLSTIPN LARKPLRDVI SEVVGRAASA VRASSSNCTS 120
  121 YLQRPRQLRT RDRLALSDCL ELFGHTLDLL GTAAAELSAG NSTAEESAAG VQTVLSAAMT 180
  181 NQYTCLDGFA GPSASEDGRV RPFIQGRIYH VAHLVSNSLA MVRRLPTQRR RGAEEEPLEG 240
  241 YGRVRRGFPS WVSASDRRRL QQQVAADVVV AKDGSGKFTT VSEAVAAAPN NSETRYVIYI 300
  301 KAGGYFENVE VGSEKTNIMF VGDGTWKTVI KASRNVVDNS TTFRSATLAV VGTGFLARDI 360
  361 TVENAAGPSK HQAVALRVNA DLSAFYRCSF AGYQDTLYAH SLRQFYRDCD IYGTVDFIFG 420
  421 DAAVVLQNCN LYARRPDPNQ KNVFTAQGRE DPNQNTGIAI QGCKVAAAAD LVPVQANFSS 480
  481 YLGRPWKTYS RTVFLQSKID SLIHPRGWLE WNGSFALDTL YYAEYMNRGD GADTSARVSW 540
  541 PGYHVLTNAT DAANFTVLNF VQGDLWLNSS SFPYILGLS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle