YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|33354201, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLLRRLLHSS RRLGHRLQTL TPASAATAAA ASSSPVSAPL PFRRPLPASS LLWPRLLSTS  60
   61 GRDDDPNKPW AFTPESGDPD PFAAGEGVEA PAGEDPLGLS AAGEDPWAKD FRAEGSEKGD 120
  121 VFEEIFKEEA ATAAVASGEK APGAGADELW TLSGEDEKDP FAEAVLGGGL EGIGGDGAAI 180
  181 DEADAGEDEE EEERKRLERR AREQELMETL KGPNRAFGDL IEASGITEDM IASLILLKDV 240
  241 RGVPGLPPLR EIEDETIEKM NATSSRADVE RQKQEEIAKA RVRQVDEKGR AYGTGKRKCS 300
  301 IARVWIQPGD GKFIVNDKQF DSYFPILDHR ADLLRPFTVT KTLGRWDVTC TVKGGGVSGQ 360
  361 VGAIRLGISR ALQNWEPGLR PNLKAAGYLT RDSRVVERKK PGKAKARKSF QWVKR

Type	Start	End	Confidence
Signal Peptide	1	38	0.93
N-region	1	29
H-region	30	35
C-region	36	38
Cleavage Site	38	39
Non-Cytoplasmic	39	415	0.99