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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|125601205, gi...
Protein type: Transmembrane
Type Confidence: 0.96
Topology Confidence: 0.92
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSSDQDDHD EDAPLFRASS GDDDDHPHPR RRSSPVGEVP VAQSIIKAAS NVCFSLFVLA  60
   61 VLVVTVVAVT YQPPDPWLQS SAAITTSLSR VLPNSTFLLP DDSLLPTGED FNSSSSTPSA 120
  121 PRRDDPDQAT ATATAAAVNG TCDPDAPLNC SDPRVLAAVK AFNAKAFFRK SIVFLSYEAP 180
  181 VPGPKPGECD VAWRFRNRRE KSWRRYRDYR RFVLVPGDGC ALDINRVGKF RSGTNAARPP 240
  241 RQKGSKNRNP RVAPPPVDAE INDTIPIVGS EAEFRRGKYL YYMRGGDHCK SMNQFIWSFL 300
  301 CGLGEAKFLN RTFVMDLNMC LSGAHTNNGK DEDGKDFRYY FDFEHLKESV SVVEEGDFLK 360
  361 DWKRWDKKKG PGRISVRKVP SYKVTPMQLK RDKSNIIWRL FDGQEPENYW YRVCEGRAAK 420
  421 VIQRPWYAIW KSKRLMNIVT EIAGRMDWDY DGLHVIRGWK AQNKQMYPNL DADTSPEALV 480
  481 DKVPKLIKQP MRNLYIATNE PFYNYFDKLR SYFHVHLLDD YKELWSNTSE WYNETTTLSG 540
  541 GRPVPFDAYM RVIVDTEVFY RAKTQVETFN NLTRDCKDGI NTCNL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle