YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|215694908, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.92
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAWPTGCLGF EAAAAVCPAA FQAYQKYYDI VSAFSNVNTR EGLAELSQVI DGMEGLRDAI  60
   61 FSDIPKLMSA LDLDDAHRFS IFYDFVFFIS RENGQKNISV QRAVGAWRMV LNGRFWLLDR 120
  121 WCNFVEKYQR YNITEDVWQQ LLAFSRCVNE DLEGYDPKGA WPVLVDDFVE HMHRIYNSCD 180
  181 CSSAMESQLN ISNTFGGINP LPGSKRKCPT RLKPNEDVDL SDNFTRSVHL APLKRLKESP 240
  241 VITKYGVWEY NAGTPLVHSP SDYCDDANLH NPRGCLQNSP SIVEDCLSKG FEGCISMKCS 300
  301 F

Type	Start	End	Confidence
Signal Peptide	1	22	0.89
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	301	0.99