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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|50939397, gi|...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.79
Topology Confidence: 0.73
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLRAVHVLAI AAAVLTLAPL AASYPWQACN GSSNYTANSA FQRNLGVLAA ALPGNASTSP  60
   61 DLLANATVGG APDTVYALAF CPPIDNQNAS GCRACVASAF ADARSLCPNN RGAHIIYDGC 120
  121 VLTFSGRDFL GAATNPADME RKLRNTENVT VSDVGEFNGA IYEVLNATAD YTAAAARRFG 180
  181 TGEISFDPTY PVIYSMAWCT PDMAPGRCRA CLADTIAQMH AYFNPNAQGA RLVGVRCAAR 240
  241 YEIYPFYTGR GMVQVPVSRP PAVPGTPGKK SKTGKILAIV LPIVAALLAS AMICFCCWRR 300
  301 RTKATKLSLS YSSRSEDIQN IESLIMDLPT LRIATDNFAE NNKLGEGGFG EVYKGSFPGG 360
  361 QTIAVKRLSQ SSGQGIGELK NELVLIAKLQ HKNLVRLVGV CLEQEEKLLV YEYMPNKSLD 420
  421 TFLFDPEKRK QIDWAKRFMI IKGITGGLQY LHEDSQLKII HRDLKASNVL LDANMNPKIS 480
  481 DFGLARLFGD DQSQETTNRV VGTYGYMAPE YALRGQYSIK SDVYSFGVLL LEIITGRKNS 540
  541 DSYNSEQAVD LLSLVWEHWA MKTITEMVDP YLRSDSSSLD EILRCIHVGL VCVQEDPMDR 600
  601 PTLSMINIML DGNTVSAKAP SRPAFFTEML GNINIGSSMY SQPYPVTDST AKHSTAMSLN 660
  661 DVTVTEPEPR 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle