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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|30841440
Protein type: Globular with Signal Peptide
Type Confidence: 0.93
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLPQFLLLLL YLTVSTAKTI TGVFNSFNSL TWANAANYGY QTPETPTWTA VLGWSLNSTT  60
   61 ADAGDTFTLI MPCVFKFITS QTSVDLTADG VSYATCDFNA GEEFTTFSSL SCTVNSVSVS 120
  121 YDKASGTVKL PFSFNVGGTG SSVDLTDSKC FTAGKNTVTF TDGDTEISTS VDFQASPISS 180
  181 SGYIASARVV PSLNKASSLF VSPQCENGYT SGIMGFVTSQ GATIDCSNIN IGISKGLNDW 240
  241 NFPVSSESFT YTKTCSSSGI IVEYENVPAG YRPFVDAYIS SENVEQYTLT YANEYTCKNG 300
  301 NTVVDPFTLT WTGYKNSEAD SNGDIIVVTT KTVTASTTAV TTLPFNPTVD KTETIEVLQP 360
  361 IPTTTITTSY VGVTTSYETF TATIGGTATV IVDTPYHITT TVTTFWTGSV TTTTTYSNPT 420
  421 GSVDTVIVEL PSPAPTVTTT EFWSESFAST TTVTNPPDGT NSVIIKEPYN PTVTTTEFWS 480
  481 ESFASTTTVT NPPDGTNSVI VKEPYNPTVT TTEFWSESFA STTTVTNPPD GTNSVIIKEP 540
  541 YNPTVTTTEF WSESFASTTT VTNPPDGTNS FIVKEPYNPT VTTTEFWSES FASTTTVTNP 600
  601 PDGTNSVIIK EPYNPTVTTT EFWSESFAST TTVTNPPDGT NSIIVMEPYN PTVTTTEFWS 660
  661 ESFASTTTVT NPPDGRNSVI VMEPYNPTVT TTEFWSESFA STTTVTNPPD GTNSVIVKEP 720
  721 YNPTVTTTEF WSESFASTTT VTNPPDGTNS VIIKEPYNPT VTTTEFWSES FASTTTVTNP 780
  781 PDGRNSVIVM EPYNPTVTTT EFWSESFAST TTVTNPPDGT NSVIVKEPYN PTVTTTEFWS 840
  841 ESFASSTTVT NPPDGTNSVI IKEPYNPTVT TTEFWSESFA STTTVTNPPD GTNSVIIKEP 900
  901 YNPTVTTTEF WSESFASTTT VTNPPDGTNS VIIKEPYNPT VTTTEFWSES FASTTTVTNP 960
  961 PDGTNSVIIK EPYNPTVTTT EFWSESFAST TTVTNPPDGT NSVIVKEPYN PTVTTTEFWS1020
 1021 ESFASTTTVT NPPDGTNSVI IKEPYNPTVT TTEFWSESFA STTPSVSSFE SKTFYSSEAQ1080
 1081 SSLEIDSSNT FMTSISVSTA SSYDESSTIV SSAFPTLHIS SYSLSTSFVP PVTLPRYVNT1140
 1141 TISSSPSFES SSMYSSVTSA VTSIDNDREV PTSTTTYLHS KLYSESISTV IQTKSSDWSL1200
 1201 SLGNSNKPES ASTVSEESLH YLSTPGPSSS EYSISFTSEK EGHVSSYVPR VSYTSSVKVS1260
 1261 ISSTMSSENG MSATHTFGIS TNTIPSSTET SIKSATVTTP VSESTNTGMS IFMSTTTESK1320
 1321 TTDITTETSV SGEVNLGSAT VKVSSSEFIS KGTVTRIMPT ELTNSESTFT ASPSFVLTST1380
 1381 ESSVIETPAT IEMSSRSSSY SVPLSKLRSE GETTRVIPTS STATGSTVIG SPSSVSTSNE1440
 1441 SIITGSSSFV STTAETISTR SIVTESIVAG SPSLVLTTTV LDTTETTITE TSIVGESSSR1500
 1501 SLTFKASSLS KGEITGTVTP EMSVSTSKAT TGTTSEVSIK ESLTTKVPTF TSTTIKPETS1560
 1561 ETQHSESRTT QIPYSETKGS QLSTANSQVS QTGSSKSSIF ESAISKDEST FVSATVKSIT1620
 1621 TPAVTQYQTS LPNPAVSVSE ESGKKSSIIE SQTENSATQH SIYFDSIETS TLSNTLANTL1680
 1681 VSGAMKNSET TSELTTSDKA IGFSTTTETS IPGATNSALS PSVDSGKSSM LGWSGGIVST1740
 1741 VSTSTRLEDS TATSSSITAA NQDSLNPSTV SKYPHGSETI DNGSNGSSHS SSALASTISA1800
 1801 SHSIKFSAHQ TTLSQSLISS STKTVIASTY DGSGSVIKLH SWFYGLVTIL FLFI

YRC Informatics Platform - Version 3.0
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