YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|49238163, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.91
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFITNAYAQV AGGVSNGPSL VTFVPFILIF GIMYFFIIRP QRAQMKKRQE MLNAVRRGDT  60
   61 VITGGGVIGK VTKVYDESGE LEVEICDGMR IRVIRSTLSD VRVKGEPISE EKSKLNTKVK 120
  121 APSKAKAVKK ENMSASKEKK AVSKEEHS

Type	Start	End	Confidence
Non-Cytoplasmic	1	18	0.91
Transmembrane Helix	19	38	0.96
Cytoplasmic	39	148	0.97