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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: ACD6_ARATH
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.49
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDSSGADLDR IEAQRSMLVS HDQRKDFSHS GGVGTTSPTG DTEPVPKFRT NLKLSDLFAL  60
   61 PGEDVEMTPE IFGGMSNGEK ECLEKLRSNG TPMERVKSNT GDSILHIAAK WGHLELVKEI 120
  121 IFECPCLLFE QNSSRQTPLH VATHGGHTKV VEALVASVTS ALASLSTEES EGLNPHVLKD 180
  181 EDGNTALYYA IEGRYLEMAT CLVNADKDAP FLGNNKGISS LYEAVDAGNK FEDLVKAILK 240
  241 TTDDNVDREV RKFNLDSKLQ GNKHLAHVAL KAKSIGVLDV ILDEYPSLMD EQDEDGRTCL 300
  301 SYGASIGYYK GLCNILNRST KGVYVCDQDG SFPIHSAAKN EHYEIIKEFI KRCPASKYLL 360
  361 NRLGQNILHV AAKNEASLTA YMLMHDKDTK HLGVGQDVDG NTPLHLAVMN WDFDSITCLA 420
  421 SRNHEILKLR NKSGLRARDI AESEVKPNYI FHERWTLALL LYAIHSSGFE SVKSLTIQSV 480
  481 PLDPKKNRHY VNALLVVAAL VATVTFAAGF TIPGGYISDS KKPNLGRATL ATNPTLFIFL 540
  541 LFDILAMQSS VATICTLIWA QLGDLALILK SLHVALPLLL FSLLCMPVAF LFGVITAIAH 600
  601 VKWLLVTISI ISGGFFLFAI FILGPHVMLQ RSHLPPSSGI FLKTFMLTID ISELFVILIK 660
  661 ACFGCVACSE 

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