YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|6468448, gi\|2...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALTTRRRAL TTLGAALTGA VALPAGTALA SQGGHGPRPL WRAHAHNDYE HPRPLLDALD  60
   61 HRFGSVEADI YLVGGQLLVA HDPEDLDPSR TLESLYLDPL AARVRAHHGR VYRRDRGSLQ 120
  121 LLIDIKTEGE ATYLELDRRL RRYKNLFTSY AHGRVFPGAV TAVVSGDRAA RAPMAAQRSR 180
  181 RAFYDGRLTD LGTVAPASFV PLISDNWTLN FTWQGVGTFP AAERRRLRDI VGAAHARGQR 240
  241 VRFWATPDVA GPARDAVWAE LLAAGVDHLN TDDLAGIEAF LDAHRDA

Type	Start	End	Confidence
Signal Peptide	1	30	0.99
N-region	1	21
H-region	22	27
C-region	28	30
Cleavage Site	30	31
Non-Cytoplasmic	31	287	0.99