YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|115472621, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGAVLGTGRV GTLTRVALTI VVFLLLLPSH ALAAAVAKDT SATLVETLPL PTTLVGPESV  60
   61 AFDKFGDGPY SGVSDGRILR WDGADKGWTT YSHAPGYNVA KCMAPKLHPA ELTESKCGRP 120
  121 LGLRFHNTSG NLYIADAYKG LMRVGPRGGE ATVLATEADG VPFKFTNGVD VNQVTGEVYF 180
  181 TDSSTRFQRS QHEMVTATGD STGRLMKYDP TTGYLDVLQS GMTYPNGLAI SADRSHLVVA 240
  241 LTGPCKLVRH WIEGPKAGTS EPFAELPGYP DNVRPDGKGG YWVALHREKT ETPYGSDTHL 300
  301 LAVRIGRKGK ILQELRGPKN VRPTEVIERG GGKLYLGSVE LGHVAVVKAT

Type	Start	End	Confidence
Signal Peptide	1	33	0.99
N-region	1	24
H-region	25	30
C-region	31	33
Cleavage Site	33	34
Non-Cytoplasmic	34	350	0.99