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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|34395233, gi|...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.94
Topology Confidence: 0.86
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRRRSSVLHA VLLLLLVAAV ALPLAAAQPW PVCGTSGGNY TAGSTYESNL LRLASTLRAN  60
   61 ASASPTLFAS GVRGAGPDAV YGLLLCRGDM NPSDCFDCGT RVGDDVAQAC NRTKDAILVY 120
  121 NQCYAQFSDT GDFLAATNNS GAYSLLISGT NISSADVAGY DRAVTELLNA TVRYAVENST 180
  181 RLFATGQRVG ADPGFRNIYS MAQCSPDLSP AQCRSCLDGL VGQWWTGFLF PRNGEGARVA 240
  241 GPRCYLRSEL GSGFYTGAPM VLLRADGLSP ASAPAPDVVP ATTLVKKNSA SKILLIVLPI 300
  301 VAVAIVAAIS VCMWTVRKKS RATKAEHLSE LDASEDLESV KSTLLTLGSL QVATDNFDES 360
  361 KKLGEGGFGA VYKGHLFGQE VAVKRMAKGS NQGLEELKNE LVLVTKLHHK NLVRLVGFCL 420
  421 EDGERLLVYE YMPNKSLDTF LFDVEQRRQL DWATRFRIIE GVARGLQYLH QDSQKKIVHR 480
  481 DMKASNVLLD ADLNPKIGDF GLARLFGQDQ TRDVTNRIVG TFGYMAPEYV IRGQYSTKSD 540
  541 VFSFGILILE IVTGQRNSGP YFAEQNEDLV SLVWRHWTEG NIVEMVDYSL DRNYPEAEVL 600
  601 KCVNIGLLCV QQNPVDRPTM ADVMILLLIY SHD

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle