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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|113611436, gi...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.95
Topology Confidence: 0.90
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRRRSTFAVL LFAAAALPLA AGQPWQLCGR RGGGGGGTYT ANSTYDTNLQ SLIAALQQNA  60
   61 STSPTLFAAG ALGAAPDAVY GLILCRGDVS SSDCYDCGTR AGQDVAPACN RTRDAILVYN 120
  121 QCYTRFSAAG DFLASANNSG QAPLMNSDNV TTADVAGYDR AVTELLSATL MYAVVNTTRL 180
  181 FATGQRVGAD PGFPNIYSAA QCTPDLSPAL CRSCLEDLVA RWWKTFPRTT VGARIVGTRC 240
  241 SLRSEVSQDK FYTGAPMLKL WADGLSPAAA AASPDAAPGT TGVKNNSANK ILEIVLPIVA 300
  301 VAIVAAVSIL LWNIRKKRRR GKAEHFTGPD AAEDFESVKS TLLSLASLQV ATDNFNESMK 360
  361 LGEGGFGAVY KGLLFRQDVA VKRLAKGSNQ GLEEVKNELV LVAKLHHKNL VQLVGFCLEE 420
  421 GERMLVYEYM PNKSLDTFLF DEEKRRQLDW TTRFRIIEGI ARGLQYLHQD SQKKIVHRDM 480
  481 KASNILLDAD MNPKIGDFGL ARLFGQDQTR EITNRIVGTF GYMSPEYVTH GQYSTKSDVF 540
  541 SFGILVIEIV TGRRRNNGPY FFEPNEDIIS IVWRHWAEGN IKEIIDHSLG RNYPEGEVLK 600
  601 CVNIGLLCVQ QNPIDRPTMA DVMVLLNSDA TSTLPAPVVH IPVASFSDGS SGYSQTVTQL 660
  661 SPR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle