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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|28411831, gi|...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.95
Topology Confidence: 0.84
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATFARHRVL LCRLAAALLL APVAAAQPWQ FCGQGGNYSA NGTYQSNLAG LSATLPKNAS  60
   61 ASRTLFAKDS LGAVPDIVYA LALCRGDVAN ATACESCVAT AFQDAQQLCP YDKDAFIVYD 120
  121 LCYLAFSNRN ILAAAADDDG SPRFLMNTQN ASAPAEVFDA AVATLLNATS SYAAENSSRR 180
  181 FATGEEAFDA AAATPTIYGL SQCTPDMSPD DCRSCLGRII ALIPRYLSRR KGGRAIGMRC 240
  241 NFRYEVGPFF AGGSMLRLPA PANSTPTAPT GGRKKNKSGT ALAIALPLVV ILLATVVICL 300
  301 SVQRWRKRSR SKQQSSYSIQ MAEDIESTDS LFIDLSTLRA ATGNFSESNR IGEGGFGSVY 360
  361 KGVLPSGEEI AVKRLSMSSG QGIEELKNEL VLVAKLQQKN LVRLVGVCLQ EHEKLLVYEY 420
  421 MPNRSIDTIL FDLEKRKELD WGKRFRIING IARALQYLHE DSQLRIIHRD LKASNVLLDS 480
  481 DYNPKISDFG LARLFEGDQT REVTSRVVGT YGYMAPEYAM RGHYSVKSDV FSFGILMIEI 540
  541 VTGRRSSGSY SFDQSYDLLS RVWEHWTMGT ILEMMDPSLT SHAPRDQMLK CIHIGLLCVQ 600
  601 DNPADRPMMS TVNIMLSSNT VSLQSPSKPS FFIPKSGTDS NIYSESYPQT SQPTHRSGMM 660
  661 SVNDVSVTEL EPR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle