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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|34393282, gi|...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.94
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATPRGHLPA CVAAVAAAAA LLTSLLPPPV AGQPLGNFCG DSGNYTANST YQGNIRSISA  60
   61 TLPKNASSSR TLFATATLGA VPDIVYALAL CRGDTANATA CAGCVAAAFQ DAQQLCPYNK 120
  121 DATVFYDACA LRFSNQNFLA STNGDNKFLI LMNTQNVSAP AKVFDAAVGV LINATADYAA 180
  181 ANSSRRFGTG EEGFNGSKIY GLAQCTPDMA TATCRSCLGG IVGMMPKYFS GKQGGRVLGL 240
  241 RCNYRYEIYP FFDGVSLLQL PAASLGAPPA PSPAAVNVTP PATTTGTRRR GNTTGRVLAI 300
  301 ALPIVAAILA AVVICFYIWK RKTERARKPS IADPTDPADI ESIDSLILSI STLRVATNNF 360
  361 DDSNKLGEGG FGAVYKGVLP SDQEIAVKRL SQSSRQGIEE LKNELVLVAK LQHKNLVRLL 420
  421 GVCLEEHEKL LVYEYMPNKS LDTILFDPDR SNVLDWWKRL KIVNAIARGL QYLHEDSQLK 480
  481 IIHRDLKASN VLLDSDFNPK ISDFGLARLF GNDQSQDVTN RVVGTYGYMA PEYAMRGHYS 540
  541 IKSDVFSFGV LILEIVTGRK NNVSYDSEQS VDLLTLVWEH WLAGTVVELA DSSMAGHCPG 600
  601 DQILKCVHIG LLCVQEDPTE RPMMSMVNVM LSSSTVSLQA PSRPAFCIQK SSVNSDSYSE 660
  661 PFRGANQSTV 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle