YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|55593863
Protein type:	Globular with Signal Peptide
Type Confidence:	0.50
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVGQEAALSL GAAMLEAPGP SDGCELSNPS ASRVSCAGQM LEVQPGLYFG GAAAVAEPDH  60
   61 LREAGITAVL TVDSEEPSFK AGPGVEDLWR LFVPALDKPE TDLLSHLDRC VAFIGQARAE 120
  121 GRAVLVHCAG ISGVGLFFSH AGVSRSVAII TAFLMKTDQL PFEKAYEKLQ ILKPEAKMNE 180
  181 GFEWQLKLYQ AMGYEVDTSS AIYKQYRLQK VTEKYPELQN LPQELFAVDP TTVSQGLKDE 240
  241 VLYKCRKCRR SLFRSSSILD HREGSGPIAF AHKRMTPSSM LTTGRQAQCT SYFIEPVQWM 300
  301 ESALLGVMDG QLLCPKCSAK LGSFNWYGEQ CSCGRWITPA FQIHKNRVDE MKILPVLGSQ 360
  361 TGKI

Type	Start	End	Confidence
Signal Peptide	1	23	0.50
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	364	0.88