YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|50934873, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.80
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLPATSTVPP TSPLPHSRAA PRRHLRAGLL HGSVATAAVV RACGVTTGHR RRMGSVRASP  60
   61 RAGGWEVAMA DKEGVGVERL VEVAQRAADA AGEVLRKYFR QRVEIIDKED QSPVTIADRE 120
  121 AEEAMVSVIL KSFPSHAVFG EENGWRCVEK SADYVWVLDP IDGTKSFITG KPLFGTLISL 180
  181 LYKGKPVIGI IDQPILRERW VGVDGMKTTL NGQEISVRPC NVLAQAYLYT TSPHLFAGEA 240
  241 EDAFIRVRDK VKVPLYGCDC YAYALLASGF VDLVVESGLK PYDFLSLVPV IEGAGGSITD 300
  301 WKGNKLHWPV SAESRPESFN VVASGDARVH KQALDALQWH

Type	Start	End	Confidence
Signal Peptide	1	42	0.74
N-region	1	33
H-region	34	39
C-region	40	42
Cleavage Site	42	43
Non-Cytoplasmic	43	340	0.99