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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|157888629, gi...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.91
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTQSALIFLL WLFGTSLAGF PNQINIGGLF MRSTVQEHSA FRFAVQLYNT NQNMTEKPFH  60
   61 LNYNVDNLES SNSFSVTHAF CSQFSRGVYA IFGFYDKKSM NTLTSFCGAL HTSFVTPSYP 120
  121 IDSDVQFVIQ MRPPLKGAVL SLLSHYKWDK FVYLYDTDRG FSILQAIMEA AVANNWQVTA 180
  181 RSVGSITDPQ EFRRIIEEMD RRQEKRYLID CEVDRINVIL EQVVTLGKNS RGYHYIIANL 240
  241 GFTNISLDKV FLGGANISGF QIINPENLVV QQFLQRWDRL DEREFPEAKN TPLKYTSALS 300
  301 YDAILVIAEA FRYLRRQRVD VSRRGSAGDC LANPAVPWSQ GIDIERALKM VQVQGMTGNI 360
  361 QFDSFGRRTN YTIDVYEMKT GGPRKIGYWN EFERFVNIMD QQFTNDSSSV ENRTIVVTTI 420
  421 MEAPYVMYKK NHMHLEGNEK YEGYCVDLAS EIAKHVGIKY RLSIVMDGKY GARDPETKSW 480
  481 NGMVGELVYG RADIAVAPLT ITLVREEVID FSKPFMSLGI SIMIKKPQKS KPGVFSFLDP 540
  541 LAYEIWMCIV FAYIGVSVVL FLVSRFSPYE WQLDETDEVK DPQTPPDPPN DFGIFNSLWF 600
  601 SLGAFMQQGC DISPRSLSGR IVGGVWWFFT LIIISSYTAN LAAFLTVERM VSPIESAEDL 660
  661 AKQTEIAYGT LDSGSTKEFF RRSKIAVYEK MWSYMKSAEP SVFAKTTPDG VARVRKSKGK 720
  721 FAFLLESTMN EYIEQRKPCD TMKVGGNLDS KGYGVATPKG SALRNAVNLA VLKLNEQGLL 780
  781 DKLKNKWWYD KGECGSGGGD SKDKTSALSL SNVAGVFYIL VGGLGLAMMV ALIEFCYKSR 840
  841 AEAKRLKLEK NAQNYKPAPP ANTQNFATYR EGYNVYGTES VKI

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle