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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|50509308, gi|...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.96
Topology Confidence: 0.83
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRLHYHHLAV VLLAAVAAAA TAAAGGEADA LLAVKAALDD PTGALASWTT NTTSSPCAWS  60
   61 GVACNARGAV VGLDVSGRNL TGGLPGAALS GLQHLARLDL AANALSGPIP AALSRLAPFL 120
  121 THLNLSNNGL NGTFPPQLSR LRALRVLDLY NNNLTGALPL EVVSMAQLRH LHLGGNFFSG 180
  181 GIPPEYGRWG RLQYLAVSGN ELSGKIPPEL GNLTSLRELY IGYFNSYSGG IPPELGNMTD 240
  241 LVRLDAANCG LSGEIPPELG NLANLDTLFL QVNGLAGGIP RELGKLASLS SLDLSNNALA 300
  301 GEIPATFADL KNLTLLNLFR NKLRGDIPEF VGDLPSLEVL QLWENNFTGG IPRRLGRNGR 360
  361 FQLLDLSSNR LTGTLPPDLC AGGKLETLIA LGNSLFGAIP ASLGKCTSLT RVRLGDNYLN 420
  421 GSIPEGLFEL PNLTQVELQD NLISGGFPAV SGTGAPNLGQ ISLSNNQLTG ALPAFIGSFS 480
  481 GVQKLLLDQN AFTGEIPPEI GRLQQLSKAD LSGNSFDGGV PPEIGKCRLL TYLDLSRNNL 540
  541 SGEIPPAISG MRILNYLNLS RNQLDGEIPA TIAAMQSLTA VDFSYNNLSG LVPATGQFSY 600
  601 FNATSFVGNP GLCGPYLGPC HPGAPGTDHG GRSHGGLSNS FKLLIVLGLL ALSIAFAAMA 660
  661 ILKARSLKKA SEARAWKLTA FQRLEFTCDD VLDSLKEENI IGKGGAGTVY KGTMPDGEHV 720
  721 AVKRLPAMSR GSSHDHGFSA EIQTLGRIRH RYIVRLLGFC SNNETNLLVY EYMPNGSLGE 780
  781 LLHGKKGGHL HWDTRYKVAV EAAKGLCYLH HDCSPPILHR DVKSNNILLD SDFEAHVADF 840
  841 GLAKFLQDSG TSECMSAIAG SYGYIAPEYA YTLKVDEKSD VYSFGVVLLE LITGKKPVGE 900
  901 FGDGVDIVQW VKTMTDSNKE HVIKILDPRL STVPVHEVMH VFYVALLCVE EQSVQRPTMR 960
  961 EVVQILSELP KPTSKQGEEP PSGEGAVFDL VVPAESAEAN EAKEQQQQQL NSPSSPPPDL1020
 1021 ISI

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle