YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|46425432
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.89
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 EQWQQGQRMV IYGAVFLITT LLILYSSSSS ADLSRSFKTS NFRQIHHTLK TTNLKKWAGK  60
   61 DGYLPVYGNK SLNLHCHHCA LVTSSSHVLG SQAGEEIDRT QCVFRMNNAP TSGHQSDVGN 120
  121 RTTVRVVAHS SVFSVVRKPA EFLNRSENPI IIFWGPSSKI SREAKGTLYH LIQRVSMTYR 180
  181 NLSFFFISPS KMQKFYALFQ KDTGRDREKS QSWLSTGWFT MVIAIEMCDN IKVYGMVPPN 240
  241 YCGYPQPKRM PYHYYKPRGP DECVTYLQNE RGLRGSHHRF ITEKQVFARW AKVYNISFTS 300
  301 PTW

Type	Start	End	Confidence
Cytoplasmic	1	8	0.89
Transmembrane Helix	9	27	0.93
Non-Cytoplasmic	28	303	0.95