YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|46425410, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.94
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKTLMRHGLA VCLVLTTMCT SLLLVYSSLG SQKERPPQQQ QQQQQQQQQQ QQQATATGST  60
   61 QLVESSPQPH RTAPVGPRQL DGYLGVADHK PLKMHCKDCA LVTSSGHLLR SQQGPHIDQT 120
  121 ECVIRMNDAP TRGYGLDVGN RTSLRVIAHS SIQRILRNRH DLLNVSQGTV FIFWGPSSYM 180
  181 RRDGKGQVYN NLQLLSQVLP RLKAFMITRH KMLQFDELFK QETGKDRKIS NTWLSTGWFT 240
  241 MTIALELCDR IDVYGMVPPD FCRDPKHPSV PYHYYEPSGP DECTMYLSHE RGRKGSHHRF 300
  301 ITEKRVFKNW ARTFNIHFFQ PDWKPEPPAV NPAEDKPVF

Type	Start	End	Confidence
Signal Peptide	1	30	0.91
N-region	1	21
H-region	22	27
C-region	28	30
Cleavage Site	30	31
Non-Cytoplasmic	31	339	0.99