YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|149039007, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.97
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKARGRLLLL ILCSLTLSAL YVFLCCWACL PLCLATCLDP HLPAPPRSTV PGPLHFRGYS  60
   61 SVPDGKPLTR ELCHSCAVVS SSGQMLGSGL GAQIDGAECV LRMNQAPTVG FEEDVGQRST 120
  121 LRVISHTSVP LLLRNYSHYF QHARDTLYVV WGQGRHMDRM LGGRTYRTLL QLTRMYPGLQ 180
  181 VYTFTERMMA YCDQIFQDET GKNRRQSGSF LSTGWFTMIL ALELCEEIVV YGMVSDSYCS 240
  241 EKSPRSVPYH YFEKGRLDEC QMYRLHEQAP RSAHRFITEK AVFSRWAKKR PIVFAHPSWK 300
  301 AK

Type	Start	End	Confidence
Signal Peptide	1	35	0.91
N-region	1	26
H-region	27	32
C-region	33	35
Cleavage Site	35	36
Non-Cytoplasmic	36	302	0.99