YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|215679064, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.91
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAVATSFATL AIARPAAERA LLASKTPSPL LSIRTGTGTA RLPSSAVFGG FTPALSAAHS  60
   61 RARFVSSATA DPKEVDLQSK ITNKVYFDIS IGNPVGKNVG RVVIGLYGDD VPQTAENFRA 120
  121 LCTGEKGFGY KGSSFHRVIK DFMIQGGDFD KGNGTGGKSI YGRTFKDENF KLVHTGPGVV 180
  181 SMANAGPNTN GSQFFICTVK TPWLDGRHVV FGQVIEGMDI VKMIESQETD RGDRPKKKVV 240
  241 ISECGELPVV

Type	Start	End	Confidence
Signal Peptide	1	19	0.89
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	250	0.99