YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|115460400, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.98
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MARRSSSSSS SSGAWRYLNP AYYLKRPKRL ALLFFVFVAA TFAFWDRQSL VREYESEISR  60
   61 LDDKVNQLRD QLRKAGVHLD ENPTGDKVSR EKLVEIDPIN NERREKVKEA MAHAWNSYVK 120
  121 YAWGMDELQP QSKNGVNSFG GLGATLVDSL DTLYIMGLKD EFQRARDWVA DSLSFDKDYD 180
  181 ASVFETTIRV VGGLLSAYDL SGDKVFLEKA KDITDRLLPA WDTPSGIPYN RINLAHGRAH 240
  241 NPGWTNGDSI LADSGTEQLE FIALSQRTGD PKYQQKAENV IRQLQKIYPS DGLLPIYINP 300
  301 HSGTASYSTI TFGAMGDSFY EYLLKVWVQG NKTEHVKHYR QMWETSMEGL LSLTKKTTPS 360
  361 NYYYICEKNG GSLSDKMDEL ACFAPGMLAL GASGYEETEK AEEIMNLAKE LARTCYNFYQ 420
  421 TTPTKLAGEN YFFHTGQDMN VGTSWNILRP ETVESLMYLW RLTGNKTYQD WGWDIFQAFE 480
  481 KNSRIESGYV GLRDVNTGEK DNMMQSFFLA ETLKYLYLLF SPPSVISFDE WVFNTEAHPL 540
  541 RIVPLNDNSK AHSVGIATPT VRPFGRKQGK QE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle