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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|115459788, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.74
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVKLAFGSCG DSFSASSIKA YVAEFIATLL FVFAGVGSAI AYGQLTKGGA LDPAGLVAIA  60
   61 IAHAFALFVG VSMAANISGG HLNPVVTFGL AVGGHITILT GIFYWVAQLL GASVACLLCS 120
  121 SPPTDRLAIP THAIAGISEI EGMVMEIVIT FALVYTVYAT AADPKKGSLG TVAPMAIGFI 180
  181 VGANILAAGP FSGSSMNPAR SFGPAVAAGN FAGNWVYWVG PLIGGGLAGL VYDDVFIASY 240
  241 QPVMIGFTVI LCDRSDQAVY AGQTSGDRAV TRCLGRVFAV MDRESAWCRM QSYIMAENYD 300
  301 IWRKVSLPYV IPEVINTAAE KIAFELNCKA RNILLSGISC SDYDRVAHLQ TAHEIWVALN 360
  361 NFHQGTNNIK EFRRDLFKKE YIKFEMKPGE ALDDYLSRFN KILSDLRSVD SSYDANYPQS 420
  421 EISRHFLNGL DMSIWEMKVT SIQESVNMST LTLDSLYTKL KTHEMNILSR KGDSKSSALV 480
  481 SSSTSLDVGA SSSKSSVLAL FNAMSDDQLE QFEEEDLVLL SNKFSRAMKN VRNRKRGEPN 540
  541 HCFECGALDH LRSHCPKLGR GKKEDDGRVK EDDVNKKKNM KEKEKKKHCI KWLIQKLIKV 600
  601 FDESEDEDES KGKQVVDLVF IARNASSDVD ESDDDNEEKL SYDQLEYAAY KFGKKLQTCS 660
  661 IVLDEKDHTI EILNAEIARL KFLIPNDDNC QSCEVLFSEI SALRYVNSVN CKKLEFEIEK 720
  721 SKKLESSFAL GFALLARVVD ELILTKNVLK KIQSGFLCKF FSQCFMCK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle