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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|32490269, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.87
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAQMAAVAV NGGSPGAVTA AAAAGGVGVA VGLGGGGAQS LYVGDLEASV TDSQLYELFS  60
   61 QAGQVMSVRV CRDISSRRSL GYAYVNFNNP VDAARALELL NFAPLNGKPI RVMYSNRDPS 120
  121 SRRSGSANIF IKNLDKAIDH KTLHDTFSAF GNILSCKVAT DEMGQSKGFG FVQYDKGEAA 180
  181 QSAIKSLNGM LINDKPVYVG PFLRKQEREN SVDKTKFNNV FVKNLSESTT KEDLVKIFGA 240
  241 YGNITSAVIM VGMDGKSRCF GFINFKSPDD AARAVEELNG KKINDKEWYV GRAQKKSERE 300
  301 IELKRRFEQS MKDAADKYQG LNLYMKNLDD SIGDDQLCEL FSNYGKITSC KIMRDANGVS 360
  361 KGSGFVAFST REEASQALTE MNGKMISGKP LYVAFAQRKE DRKAMLQAQF SQVRPVPMTP 420
  421 SMAPRLPMYP PMAPLGQQLF YGQAPPAIMP PQPGFGFQQQ LVPGMRPGGA HMPNYFVPVV 480
  481 QQGQQGPRPG IRRSGAGSAQ GQQSAQPFQQ QMLPRGRVYR YPPAHNMPDV PPMPGVAGGM 540
  541 IQSYDMGGFP VRDAGLSPAP IGTLTSALAN ANPEQQRTIL GESLYPLVEL LEQNHAAKVT 600
  601 GMLLEMDQTE VLHLLESPEA LKSKVAEAMD VLRNVAQQHN ANTPTSQLAA LSLGDAIIS

YRC Informatics Platform - Version 3.0
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