YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|29468576
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.52
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSTWANLGLQ DSSSPLMEQL IFFHDHALMI LVMITVLVGY LMFTLFFNKY VNRYLLHGQT  60
   61 IEIIWTILPA IILLFIAFPS LRLLYLLDEI NEPSVTLKAI GHQWYWSYEY SDFNNVEFDS 120
  121 YMIPTNELPV DGFRLLDVDN RVVLPMNSQI RILVTAADVI HSWTVPALGV KVDGTPGRLN 180
  181 QTNFLINRPG LFYGQCSEIC GANHSFMPIV IESIPVNYFI KWISNNVNS

Type	Start	End	Confidence
Non-Cytoplasmic	1	20	0.52
Transmembrane Helix	21	47	0.82
Cytoplasmic	48	60	0.44
Transmembrane Helix	61	85	0.81
Non-Cytoplasmic	86	229	0.53